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software program turbosequest v.27  (Thermo Fisher)


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    Structured Review

    Thermo Fisher software program turbosequest v.27
    Software Program Turbosequest V.27, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/turbosequest+software/pmc11059206-1065-23-26
    Average 90 stars, based on 1 article reviews
    software program turbosequest v.27 - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Tandem Mass Spectroscopy:

    Article Title: DHX9 regulates production of hepatitis B virus-derived circular RNA and viral protein levels
    Article Snippet: The resulting tryptic peptides were separated and analyzed using reversed phase capillary high-performance liquid chromatography directly coupled to a Finnigan LCQ ion trap mass spectrometer (LC-MS/MS) with a slight modification. .. The individual MS/MS spectra were processed using TurboSEQUEST software (Thermo Quest, San Jose, CA, USA). .. The generated peak list files were used to query either the MSDB database or NCBI using the MASCOT program ( http://www.matrixscience.com ).

    Article Title: Anti-proliferative effect of auriculataoside A on B16 melanoma 4A5 cells by suppression of Cdc42-Rac1-RhoA signaling protein levels.
    Article Snippet: Auriculataoside A, an anthracenone dimer glycoside isolated from Cassia auriculata seed, shows anti-proliferative effects on cell line B16 melanoma 4A5 cells with an IC50 value of 0.82 μM.. However, it shows no such effect on normal human dermal fibroblast (HDF) cells.. To evaluate the mode of action underlying the anti-proliferative effect of auriculataoside A on cells, we examined changes in whole protein expression after treatment with auriculataoside A and found that the expression Cdc42, RhoA, and Rac1, which are Rho family GTPases, was reduced.

    Article Title: Protein Expression Level Changes in Weissella koreensis during Garlic Media Fermentation
    Article Snippet: .. The individual spectra from MS/MS were processed using the TurboSEQUEST software (Thermo Quest, San Jose, CA, USA). .. The generated peak list files were used to query either the MSDB database or NCBI using the MASCOT program ( http://www.matrixscience.com , accessed on 30 November 2020).

    Article Title: Anti-invasive Activity of Lawsonia inermis Branch and Its Potential Target Protein
    Article Snippet: After digestion with trypsin, the proteins were separated and analyzed using reversed phase capillary HPLC directly coupled to a Finnigan LCQ ion trap mass spectrometer (LC-MS/MS) by Genomine Inc. .. The individual spectra from MS/MS were processed using the TurboSEQUEST software (Thermo Quest, San Jose, CA). .. The generated peak list files were used to query either MSDB database or NCBI using the MASCOT program (http://www.matrixscience.com).

    Article Title: Insulin signaling mediates previtellogenic development and enhances juvenile hormone-mediated vitellogenesis in a lepidopteran insect, Maruca vitrata
    Article Snippet: After in-gel digestion, the resulting tryptic peptides were analyzed using reversed phase HPLC coupled to an ion trap mass spectrometer (LC-MS/MS) (LCQ Deca XP Plus, Thermo Finnigan, San Jose, CA, USA) using a method of Zuo et al. [ ]. .. Individual spectra from MS/MS were processed using TurboSEQUEST software (Thermo Quest). ..

    Article Title: Diagnostic method for gastric cancer
    Article Snippet: .. Spectra from MS/MS were processed using a TurboSEQUEST software (Thermo Quest, San Jose, Calif.). .. The generated peak list files were used to obtain either National Center for Biotechnology Information (NCBI) database or Matrix Science database (MSDB) using the MASCOT program (http://www.matrixscience.com).

    Software:

    Article Title: DHX9 regulates production of hepatitis B virus-derived circular RNA and viral protein levels
    Article Snippet: The resulting tryptic peptides were separated and analyzed using reversed phase capillary high-performance liquid chromatography directly coupled to a Finnigan LCQ ion trap mass spectrometer (LC-MS/MS) with a slight modification. .. The individual MS/MS spectra were processed using TurboSEQUEST software (Thermo Quest, San Jose, CA, USA). .. The generated peak list files were used to query either the MSDB database or NCBI using the MASCOT program ( http://www.matrixscience.com ).

    Article Title: Anti-proliferative effect of auriculataoside A on B16 melanoma 4A5 cells by suppression of Cdc42-Rac1-RhoA signaling protein levels.
    Article Snippet: Auriculataoside A, an anthracenone dimer glycoside isolated from Cassia auriculata seed, shows anti-proliferative effects on cell line B16 melanoma 4A5 cells with an IC50 value of 0.82 μM.. However, it shows no such effect on normal human dermal fibroblast (HDF) cells.. To evaluate the mode of action underlying the anti-proliferative effect of auriculataoside A on cells, we examined changes in whole protein expression after treatment with auriculataoside A and found that the expression Cdc42, RhoA, and Rac1, which are Rho family GTPases, was reduced.

    Article Title: Protein Expression Level Changes in Weissella koreensis during Garlic Media Fermentation
    Article Snippet: .. The individual spectra from MS/MS were processed using the TurboSEQUEST software (Thermo Quest, San Jose, CA, USA). .. The generated peak list files were used to query either the MSDB database or NCBI using the MASCOT program ( http://www.matrixscience.com , accessed on 30 November 2020).

    Article Title: Skin whitening composition, and method for screening for materials having skin whitening effect
    Article Snippet: .. Tandem MS was performed at m/z=450-2000 Da, and individual spectrum was processed using TurboSEQUEST software (Thermo Quest, San Jose, Calif.). .. The obtained peak lists were used to query the MSDB or NCBI databases using the MASCOT program (http://www.matrixscience.com). (6) Western Blot and Silver Staining Cells or isolated exosomes were lysed with lysis buffer (1% NP-40, 0.05 M Tris-HCl, pH 7.5, 0.15 M NaCl, and 0.01 M MgCl2) containing protease inhibitors (Sigma).

    Article Title: Anti-invasive Activity of Lawsonia inermis Branch and Its Potential Target Protein
    Article Snippet: After digestion with trypsin, the proteins were separated and analyzed using reversed phase capillary HPLC directly coupled to a Finnigan LCQ ion trap mass spectrometer (LC-MS/MS) by Genomine Inc. .. The individual spectra from MS/MS were processed using the TurboSEQUEST software (Thermo Quest, San Jose, CA). .. The generated peak list files were used to query either MSDB database or NCBI using the MASCOT program (http://www.matrixscience.com).

    Article Title: Insulin signaling mediates previtellogenic development and enhances juvenile hormone-mediated vitellogenesis in a lepidopteran insect, Maruca vitrata
    Article Snippet: After in-gel digestion, the resulting tryptic peptides were analyzed using reversed phase HPLC coupled to an ion trap mass spectrometer (LC-MS/MS) (LCQ Deca XP Plus, Thermo Finnigan, San Jose, CA, USA) using a method of Zuo et al. [ ]. .. Individual spectra from MS/MS were processed using TurboSEQUEST software (Thermo Quest). ..

    Article Title: Diagnostic method for gastric cancer
    Article Snippet: .. Spectra from MS/MS were processed using a TurboSEQUEST software (Thermo Quest, San Jose, Calif.). .. The generated peak list files were used to obtain either National Center for Biotechnology Information (NCBI) database or Matrix Science database (MSDB) using the MASCOT program (http://www.matrixscience.com).

    Article Title: Bioactive Peptide Improves Diet-Induced Hepatic Fat Deposition and Hepatocyte Proinflammatory Response in SAMP8 Ageing Mice.
    Article Snippet: .. The ions series for chosen peptides from the MS-MS-TIC chromatogram were analyzed against protein database (UniProt, Solanum tuberosum) by TurboSequest software (Thermo Fisher Scientific, MA, USA). ..



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